I know... very annoying, it's just off teh side of the screen, however till it is fixed I do have a solution:
1: you cannot click it, however, you can select it from the ship list to the right
2: it seems the game client fails to show your selected ship's movement path when it is offscreen (in this case off map as well) so just click toward the middle and send it in... next turn it should be on the map (if curious where it is, just keep clicking around the map till you see it wanting to go the shortest distance)
3: chances are if it's off map... you should be able to jump it out if none of the above help...
(on another note, if you can't jump within 20 hexes of a planet... how can you jump in inside that range?...

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